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research:publications [2017/01/14 21:23]
atif
research:publications [2017/12/12 23:40] (current)
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 ==== Preprints and submitted work==== ==== Preprints and submitted work====
  
-  ​- Mariusz Bojarski, Anna Choromanska,​ Krzysztof Choromanski,​ Francois Fagan, Cedric Gouy-Pailler,​ Anne Morvan, Nouri Sakr, Tamas Sarlos, Jamal Atif. [[https://​arxiv.org/​pdf/​1610.06209.pdf|Structured adaptive and random spinners for fast machine learning computations]]. arXiv preprint arXiv:​1610.06209,​ 2016. //Work with Google NYC. Submitted to AISTAT 2017//. ''​Category'':​ Machine Learning +  ​Marc Aiguier, Jamal Atif, Isabelle Bloch, Céline Hudelot. ​\\ [[https://​arxiv.org/​submit/​1777099/​view|A finite basis theorem for the description logic ALC]]. arXiv preprint arXiv:​1502.07634,​ 2016. \\ //Submitted to Information Processing Letters//​. ​\\ ''​Category'':​ Artificial Intelligence,​ Logics 
-  - Marc Aiguier, Jamal Atif, Isabelle Bloch, Céline Hudelot. [[https://​arxiv.org/​submit/​1777099/​view|A finite basis theorem for the description logic ALC]]. arXiv preprint arXiv:​1502.07634,​ 2016. //Submitted to Information Processing Letters//. ''​Category'':​ Artificial Intelligence,​ Logics +
-  - Marc Aiguier, Jamal Atif, Isabelle Bloch, Céline Hudelot. [[https://​arxiv.org/​submit/​1777104/​view| Belief Revision, Minimal Change and Relaxation: A General Framework based on Satisfaction Systems, and Applications to Description Logics]].arXiv preprint arXiv:​1502.02298. //Submitted to Artificial Intelligence Journal//. ''​Category'':​ Artificial Intelligence,​ Logics, Knowledge representation and Reasoning.+
  
 ==== Published papers==== ==== Published papers====
 +==2018==
 +  * Marc Aiguier, Jamal Atif, Isabelle Bloch, Céline Hudelot.\\ [[https://​arxiv.org/​submit/​1777104/​view| Belief Revision, Minimal Change and Relaxation: A General Framework based on Satisfaction Systems, and Applications to Description Logics]]. arXiv preprint arXiv:​1502.02298. //to appear in **Artificial Intelligence Journal**//​. \\ ''​Category'':​ Artificial Intelligence,​ Logics, Knowledge representation and Reasoning.
 +
 ==2017== ==2017==
-   - Yoann Isaac, Quentin Barthélemy,​ Cédric Gouy-Pailler,​ Michèle Sebag, Jamal Atif. [[https://​arxiv.org/​pdf/​1609.09525|Multi-dimensional signal approximation with sparse structured priors using split Bregman iterations]],​ //Signal Processing//,​ 2017, vol. 130, p. 389-402. ''​Category'':​ Machine Learning+  *  Fabien Labernia, Bruno Zanuttini, Brice Mayag, Florian Yger, and Jamal Atif. Online learning of acyclic conditional preference networks from noisy data. [[http://​icdm2017.bigke.org/​|IEEE ICDM 2017]]. ''​Category'':​ Machine Learning. 
 + 
 +  * Fabien Labernia, Florian Yger, Brice Mayag, and Jamal Atif. [[https://​link.springer.com/​epdf/​10.1007/​s40070-017-0070-3?​author_access_token=HWCfZE4UebuxQPMCupkMvve4RwlQNchNByi7wbcMAY7WUX7Rbyf3E6mU8qw1FPbXAy_v64uxBVHp7FeUApBG6-VPlHsgskrvYHWU0-80nkRecRN1-Ia16MkW7PvFs2jAoepUqfg913Oy-SaCmV-kzw%3D%3D|Query-based learning of acyclic conditional preference networks from contradictory preferences]]. //EURO Journal on Decision Processes//,​ 2017. ''​Category'':​ Machine Learning 
 + 
 +  * Mariusz Bojarski, Anna Choromanska,​ Krzysztof Choromanski,​ Francois Fagan, Cedric Gouy-Pailler,​ Anne Morvan, Nouri Sakr, Tamas Sarlos, Jamal Atif. [[https://​arxiv.org/​pdf/​1610.06209.pdf|Structured adaptive and random spinners for fast machine learning computations]]. arXiv preprint arXiv:​1610.06209,​ 2016.  //Work with Google NYC. Accepted at [[http://​www.aistats.org/​|AISTAT 2017]]//. ''​Category'':​ Machine Learning 
 + 
 +  * Yoann Isaac, Quentin Barthélemy,​ Cédric Gouy-Pailler,​ Michèle Sebag, Jamal Atif. [[https://​arxiv.org/​pdf/​1609.09525|Multi-dimensional signal approximation with sparse structured priors using split Bregman iterations]],​ //Signal Processing//,​ 2017, vol. 130, p. 389-402. ''​Category'':​ Machine Learning 
 + 
 +  * Timothée Evain, Xavier Ripoche, J. Atif et Isabelle Bloch. Semi-automatic teeth segmentation in cone-beam computed tomography by graph-cut with statistical shape prior. //IEEE International Symposium on Biomedical Imaging//, Melbourne, Australia, 2017. ''​Category'':​ Machine Learning, image processing, medical imaging 
 + 
 ==2016== ==2016==
   * Isabelle Bloch and Jamal Atif. [[https://​www.degruyter.com/​downloadpdf/​j/​mathm.2016.1.issue-1/​mathm-2016-0005/​mathm-2016-0005.xml|Defining and computing Hausdorff distances between distributions on the real line and on the circle: link between optimal transport and morphological dilations]],​ //​Mathematical Morphology-Theory and Applications//,​ 2016, vol. 1, no 1, p. 79-99.   * Isabelle Bloch and Jamal Atif. [[https://​www.degruyter.com/​downloadpdf/​j/​mathm.2016.1.issue-1/​mathm-2016-0005/​mathm-2016-0005.xml|Defining and computing Hausdorff distances between distributions on the real line and on the circle: link between optimal transport and morphological dilations]],​ //​Mathematical Morphology-Theory and Applications//,​ 2016, vol. 1, no 1, p. 79-99.
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   * Y. Yang, R. De Aldama, J. Atif, and I. Bloch. **Efficient semantic tableau generation for abduction   * Y. Yang, R. De Aldama, J. Atif, and I. Bloch. **Efficient semantic tableau generation for abduction
 in propositional logic**. In //European Conference on Artificial Intelligence (ECAI)//, The Hague, The Netherlands,​ 2016 in propositional logic**. In //European Conference on Artificial Intelligence (ECAI)//, The Hague, The Netherlands,​ 2016
 +
 +  * Fabien Labernia, Florian Yger, Brice Mayag, Jamal Atif : **Query-based learning of acyclic conditional preference networks from noisy data**. DA2PL 2016 (Paderborn).[[http://​www.lamsade.dauphine.fr/​~flabernia/​Recherche/​cp-net_da2pl.pdf|pdf]]
  
   * Yifan Yang, Jamal Atif, Isabelle Bloch: **Abductive reasoning for image interpretation based on spatial concrete domains and description logics**. Conférence Nationale en Intelligence Artificielle RFIA-CNIA 2016: 181--188   * Yifan Yang, Jamal Atif, Isabelle Bloch: **Abductive reasoning for image interpretation based on spatial concrete domains and description logics**. Conférence Nationale en Intelligence Artificielle RFIA-CNIA 2016: 181--188
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   * S. Chevallier, Q. Barthélemy,​ and J. Atif. **On the need for metrics in dictionary learning assessment**. In //​Proceedings of the 22nd IEEE European Signal Processing Conference, (EUSIPCO)//,​ pages 1427–1431,​ Lisbon, Portugal, Sep 1-5 2014. IEEE.   * S. Chevallier, Q. Barthélemy,​ and J. Atif. **On the need for metrics in dictionary learning assessment**. In //​Proceedings of the 22nd IEEE European Signal Processing Conference, (EUSIPCO)//,​ pages 1427–1431,​ Lisbon, Portugal, Sep 1-5 2014. IEEE.
  
-  * L. Linguet and J. Atif. Modeling time series of solar irradiance from satellite data through particle filtering and joint probability distribution. In //​IEEE-IGARSS//,​ Canada, 2014.+  * L. Linguet and J. Atif. **Modeling time series of solar irradiance from satellite data through particle filtering and joint probability distribution**. In //​IEEE-IGARSS//,​ Canada, ​2014. 
 + 
 +  * C. Hudelot, J. Atif, and I. Bloch. **ALC(F) : a new description logics for spatial reasoning in images**. In //1st International Workshop on Computer vision + ONTology Applied Cross-disciplinary Technologies (CONTACT 2014)//, Zurich, Switzerland,​ September ​2014.
  
  
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   * O. Nempont, J. Atif, and I. Bloch. {{Research:​infscnempont.pdf|A constraint propagation approach to structural model based image segmentation and recognition}}. in  //​Information Sciences//,​246 :1–27, 2013.   * O. Nempont, J. Atif, and I. Bloch. {{Research:​infscnempont.pdf|A constraint propagation approach to structural model based image segmentation and recognition}}. in  //​Information Sciences//,​246 :1–27, 2013.
- 
-  * G. Fouquier, J. Atif, and I. Bloch. Sequential model-based segmentation and recognition of image structures driven by visual features and spatial relations. //Computer Vision and Image Understanding//,​ 116(1):​146–165,​ January 2012. ([[http://​dx.doi.org/​10.1016/​j.cviu.2011.09.004|Springer DOI]]), ({{research:​cviu11.pdf|Preprint}}). 
  
   * I. Bloch, J. Atif.{{Research:​eusflat2013_submission_59_1_.pdf|Distance to bipolar information from morphological dilation}}. In //The 8th conference of the European Society for Fuzzy Logic and Technology, EUSFLAT-2013//,​ pages 266–273, Milan, Italy, September 2013.   * I. Bloch, J. Atif.{{Research:​eusflat2013_submission_59_1_.pdf|Distance to bipolar information from morphological dilation}}. In //The 8th conference of the European Society for Fuzzy Logic and Technology, EUSFLAT-2013//,​ pages 266–273, Milan, Italy, September 2013.
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   * Y. Isaac, Q. Barthélémy,​ J. Atif, C.  Gouy-Pailler and M. Sebag. {{Research:​isaac_icassp_13.pdf|Multi-dimensional sparse structured signal approximation using split Bregman iterations}}. In //38th International Conference on Acoustics, Speech, and Signal Processing (ICASSP)//, pages 3826-3830, Vancouver, Canada, May 2013.   * Y. Isaac, Q. Barthélémy,​ J. Atif, C.  Gouy-Pailler and M. Sebag. {{Research:​isaac_icassp_13.pdf|Multi-dimensional sparse structured signal approximation using split Bregman iterations}}. In //38th International Conference on Acoustics, Speech, and Signal Processing (ICASSP)//, pages 3826-3830, Vancouver, Canada, May 2013.
  
-  - O. Nempont, J. Atif, E. Angelini, and I. Bloch. A New Fuzzy Connectivity Measure for Fuzzy Sets and Associated Fuzzy Attribute Openings. //Journal of Mathematical Imaging and Vision//, 34:​107–136,​ 2009.([[http://​link.springer.com/​article/​10.1007%2Fs10851-009-0136-3|Springer DOI]])), ({{research:​jmiv09nempont.pdf|Preprint}}) +  ​*  Y. Isaac, Q. Barthélémy,​ J. Atif, C. Gouy-Pailler, and M. Sebag. **Régularisations spatiales pour la décomposition de signaux eeg sur un dictionnaire temps-fréquence**. In //GRETSI, Groupe d’Etudes du Traitement du Signal et des Images//, pages xxx–xx, Brest, France, September 2013. 
-  ​H. Khotanlou, O. Colliot, J. Atif, and I. Bloch. 3D Brain Tumor Segmentation in MRI Using Fuzzy Classification,​ Symmetry Analysis and Spatially Constrained Deformable Models. //Fuzzy Sets and Systems//, (160):​1457–1473,​ 2009.([[http://​dx.doi.org/​10.1016/​j.fss.2008.11.016|Elsevier DOI]]), ({{research:​fss09-hassan.pdf|Preprint}}) + 
-  - C. Hudelot, J. Atif, and I. Bloch. Fuzzy Spatial Relation Ontology for Image Interpretation. //Fuzzy Sets and Systems//, 159:​1929–1951,​ 2008.([[http://​dx.doi.org/​10.1016/​j.fss.2008.02.011|Elsevier DOI]])({{research:​fss-spatialontology-2008.pdf|Preprint}}) +==2012== 
-  ​J. Puentes, B. Batrancourt,​ J. Atif, E. Angelini, L. Lecornu, A. Zemirline, I. Bloch, G. Coatrieux, and C. Roux. Integrated Multimedia Electronic Patient Record and Graph-Based Image Information for Cerebral Tumors. //Computers in Biology and Medicine//, 38(4):​425–437,​ 2008. ([[http://​dx.doi.org/​10.1016/​j.compbiomed.2008.01.009|DOI]]) ({{research:​cbm-08.pdf|Preprint}})+  * G. Fouquier, J. Atif, and I. Bloch. **Sequential model-based segmentation and recognition of image structures driven by visual features and spatial relations**. //Computer Vision and Image Understanding//,​ 116(1):​146–165,​ January 2012. ([[http://​dx.doi.org/​10.1016/​j.cviu.2011.09.004|Springer DOI]]), ({{research:​cviu11.pdf|Preprint}}). 
 + 
 +  * L. Linguet and J. Atif. **A particle filter approach for solar radiation estimate using satellite image 
 +and in situ data**. In //1st EARSeL Workshop on Temporal Analysis of Satellite Images//, pages 208–216, Mykonos, Greece, May 2012. 
 + 
 +==2011== 
 +  * J. Atif, C. Hudelot, and I. Bloch. **Abduction in description logics using formal concept analysis and mathematical morphology : application to image interpretation**. In //8th International Conference on Concept Lattices and Their Applications (CLA2011)//,​ pages 405–408, Nancy, Paris, October 2011. 
 + 
 +  * J. Atif, C. Hudelot, and I. Bloch. Abduction dans les logiques de description : apport de l’analyse formelle de concepts et de la morphologie mathématique. In //​Représentation et Raisonnement sur le Temps et l’Espace (Atelier RTE 2011)//, Chambery, France, May 2011.{{research:​rte2011.pdf|pdf}} 
 + 
 +==2010== 
 +  * C. Hudelot, J. Atif, and I. Bloch. **Integrating bipolar fuzzy mathematical morphology in description logics for spatial reasoning**. In //European Conference on Artificial Intelligence (ECAI 2010)//, pages 497–502, Lisbon, Portugal, August 2010. 
 + 
 +  * O. Nempont, J. Atif, E. D. Angelini, and I. Bloch. **Propagation de contraintes pour la segmentation et la reconnaissance de structures anatomiques à partir d’un modèle structurel**. //​Information - Interaction - Intelligence (I3)//, 10(1), December 2010. 
 + 
 +==2009== 
 +  * O. Nempont, J. Atif, E. Angelini, and I. Bloch. ​**A New Fuzzy Connectivity Measure for Fuzzy Sets and Associated Fuzzy Attribute Openings**. //Journal of Mathematical Imaging and Vision//, 34:​107–136,​ 2009.([[http://​link.springer.com/​article/​10.1007%2Fs10851-009-0136-3|Springer DOI]])), ({{research:​jmiv09nempont.pdf|Preprint}}) 
 + 
 +  ​H. Khotanlou, O. Colliot, J. Atif, and I. Bloch. 3D Brain Tumor Segmentation in MRI Using Fuzzy Classification,​ Symmetry Analysis and Spatially Constrained Deformable Models. //Fuzzy Sets and Systems//, (160):​1457–1473,​ 2009.([[http://​dx.doi.org/​10.1016/​j.fss.2008.11.016|Elsevier DOI]]), ({{research:​fss09-hassan.pdf|Preprint}}) 
 +  ​ 
 +  * J. Atif and J. Darbon. {{research:​icip.atifdarbon.09.pdf|Copula-set measures over topographic maps for change detection}}. In //IEEE International Conference on Image Processing//,​ pages 2881 – 2884, Cairo, Egypt, Nov 2009. 
 + 
 +==2008== 
 + 
 +  * C. Hudelot, J. Atif, and I. Bloch. Fuzzy Spatial Relation Ontology for Image Interpretation. //Fuzzy Sets and Systems//, 159:​1929–1951,​ 2008.([[http://​dx.doi.org/​10.1016/​j.fss.2008.02.011|Elsevier DOI]])({{research:​fss-spatialontology-2008.pdf|Preprint}}) 
 + 
 +  ​J. Puentes, B. Batrancourt,​ J. Atif, E. Angelini, L. Lecornu, A. Zemirline, I. Bloch, G. Coatrieux, and C. Roux. Integrated Multimedia Electronic Patient Record and Graph-Based Image Information for Cerebral Tumors. //Computers in Biology and Medicine//, 38(4):​425–437,​ 2008. ([[http://​dx.doi.org/​10.1016/​j.compbiomed.2008.01.009|DOI]]) ({{research:​cbm-08.pdf|Preprint}}) 
 + 
 +  * C. Hudelot, J. Atif, and I. Bloch. {{research:​ecai2008_celine.pdf|A Spatial Relation Ontology Using Mathematical Morphology and Description Logics for Spatial Reasoning}}. In //​ECAI-Workshop on Spatial and Temporal Reasoning//,​ pages 21–25, Patras, Greece, jul 2008. 
 + 
 +  * O. Nempont, J. Atif, E. Angelini, and I. Bloch. {{research:​ecai2008_olivier.pdf|Structure Segmentation and Recognition in Images Guided by Structural Constraint Propagation}}. In //European Conference on Artificial Intelligence (ECAI)//, pages 621–625, Patras, Greece, jul 2008. 
 + 
 +  * G. Fouquier, J. Atif, and I. Bloch. {{research:​ecai2008-geoffroy.pdf|Sequential Spatial Reasoning in Images based on Pre-Attention Mechanisms and Fuzzy Attribute Graphs}}. In //European Conference on Artificial Intelligence (ECAI)//, pages 611–615, Patras, Greece, jul 2008. 
 + 
 +  * O. Nempont, J. Atif, E. Angelini, and I. Bloch. {{research:​ipmu2008olivier.pdf|Fuzzy Attribute Openings Based on a New Fuzzy Connectivity Class. Application to Structural Recognition in Images}}. In //​International Conference on Information Processing and Managmenent of Uncertainty (IPMU)//, pages 652–659, Malaga, Spain, jun 2008.  
 +   
 +  * G. Fouquier, J. Atif, and I. Bloch. {{research:​ipmu2008geoffroy.pdf|Incorporating a pre-attention mechanism in fuzzy attribute graphs for sequential image segmentation}}. In //​International Conference on Information Processing and Management of Uncertainty (IPMU)//, pages 840–847, Torremolinos (Malaga), Spain, jun 2008. 
 +   
 +  * O. Nempont, J. Atif, E. Angelini, and I. Bloch. {{research:​dgci2008nempont.pdf|A New Fuzzy Connectivity Class. Application to Structural Recognition in Images}}. In //Discrete Geometry for Computer Imagery (DGCI)//, volume LNCS 4992, pages 446–457, Lyon, 2008. 
 + 
 +  * C. Hudelot, J. Atif, and I. Bloch. FSRO : une ontologie de relations spatiales floues pour l’inteprétation d’images. //Revue Nouvelles Technologies de l'​Information ​ (RNTI)//, 14 :55–86, 2008. 
 + 
 +  * C. Hudelot, J. Atif, and I. Bloch. Intégration de la morphologie mathématique floue dans une logique de description pour le raisonnement spatial. In // Rencontres Francophones sur la Logique Floue et ses Applications (LFA)//, pages 336–343, Lens, France, oct 2008. 
 +   
 +==2007== 
 +  * E. Aldea, G. Fouquier, J. Atif, and I. Bloch. {{research:​2007.isvc.fouquier.pdf|Kernel Fusion for Image Classification Using Fuzzy Structural Information}}. In //3rd International Symposium on Visual Computing ISVC07//, volume LNCS 4842, pages 307– 317, Lake Tahoe, USA, nov 2007. 
 + 
 +  * ED Angelini, J. Atif, J. Delon, E. Mandonnet, H. Duffau, and L. Capelle. Detection of glioma evolution on longitudinal MRI studies. In //4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro//. ISBI, pages 49–52, 2007. 
 +   
 +  * J. Atif, C. Hudelot, G. Fouquier, I. Bloch, and E. Angelini. {{research:​ijcai07-034.pdf|From Generic Knowledge to Specific Reasoning for Medical Image Interpretation using Graph-based Representations}}. In //​International Joint Conference on Artificial Intelligence (IJCAI)//, pages 224–229, 2007, Hyderabad, India, jan 2007. 
 +   
 +  * C. Hudelot, J. Atif, and I. Bloch. An Ontology of Spatial Relations using Fuzzy Concrete Domains. In //AISB symposium on Spatial Reasoning and Communication//,​ Newcastle, UK, apr 2007. 
 +   
 +  * O. Nempont, J. Atif, E. Angelini, and I. Bloch. {{research:​ipmi2007nempont.pdf|Combining Radiometric and Spatial Structural Information in a New Metric for Minimal Surface Segmentation}}. In //​Information Processing in Medical Imaging// (IPMI 2007), volume LNCS 4584, pages 283–295, Kerkrade, The Netherlands,​ jul 2007.  
 +   
 +  * E. Aldea, J. Atif, and I. Bloch. {{research:​gbr2007-emi.pdf|Image Classification using Marginalized Kernels for Graphs}}. In //6th IAPR-TC15 Workshop on Graph-based Representations in Pattern Recognition//,​ GbR’07, volume 1, pages 103–113, Ali- cante, Spain, jun 2007. 
 +   
 +  * G. Fouquier, J. Atif, and I. Bloch. {{research:​2007.gbr.fouquier.pdf|Local Reasoning in Fuzzy Attributes Graphs for Optimizing Sequential Segmentation}}. In 6th //IAPR-TC15 Workshop on Graph-based Representations in Pattern Recognition//,​ GbR’07, volume 1, pages 138–147, Alicante, Spain, jun 2007.  
 +   
 +  * J. Atif, C. Hudelot, O. Nempont, N. Richard, B. Batrancourt,​ E. Angelini, and I. Bloch. {{research:​isbi07_jamal.pdf|GRAFIP:​ A Framework for the Representation of Healthy and Pathological Cerebral Information}}. In //ISBI// 2007, pages 205–208, Washington DC, USA, apr 2007. 
 +   
 +  * I. Bloch, C. Hudelot, and J. Atif. {{research:​icapr07_invited.pdf|On the Interest of Spatial Relations and Fuzzy Representations for Ontology-Based Image Interpretation}}. In International Conference on Advances in Pattern Recognition,​ ICAPR’07, pages 15–25, Kolkata, India, jan 2007. **Invited paper**.  
 +   
 +  * H. Khotanlou, J. Atif, E. Angelini, H. Duffau, and I. Bloch. {{research:​isbi07_hassan.pdf|Adaptive Segmentation of Internal Brain Structures in Pathological MR Images Depending on Tumor Types}}. In //ISBI// 2007, pages 588–591, Washington DC, USA, apr 2007.  
 + 
 +  * E. Aldea, G. Fouquier, J. Atif, and I. Bloch. Classification d’images par fusion d’attributs flous de graphes, relations spatiales et noyaux marginalisés. In// Rencontres Francophones sur la Logique Floue et ses Applications (LFA 2007)//, pages 25–32, Nimes, France, nov 2007. 
 + 
 +  * J. Atif, C. Hudelot, and I. Bloch. Adaptation de connaissances génériques pour l’interprétation d’images médicales : représentations par onologies et par graphes et modélisation floue. In //7e journées francophones Extraction et Gestion des Connaissances - Extraction de Connaissances et Images (EGC-ECOI’07)//,​ pages 51–61, Namur, Belgique, jan 2007.{{research:​egc-ecoi07.pdf|pdf}} 
 + 
 +==2006== 
 +  * J. Atif, H. Khotanlou, E. Angelini, H. Duffau, and I. Bloch. Segmentation of Internal Brain Structures in the Presence of a Tumor. In //MICCAI Workshop on Clinical Oncology//, pages 61–68, Copenhagen, oct 2006. 
 +   
 +  * J. Puentes, B. Batrancourt,​ L. Lecornu, J. Atif, A. Zemirline, G. Coatrieux, E. Angelini, I. Bloch, and C. Roux. Enhancing Electronic Patient Record Functionality through Information Extraction from Images. In //IEEE International Conference on Information and Communication Technologies:​ From Theory To Applications//​ ICTTA 2006, pages 978–983, Damascus, Syria, apr 2006. 
 +   
 +  * C. Hudelot, J. Atif, O. Nempont, B. Batrancourt,​ E. Angelini, and I. Bloch. GRAFIP: a Framework for the Representation of Healthy and Pathological Anatomical and Functional Cerebral Information. In //Human Brain Mapping//, Florence, Italy, jun 2006. 
 +   
 +  * B. Batrancourt,​ D. Hasboun, J. Atif, C. Hudelot, E. Angelini, and I. Bloch. A Clustering View of the Human Brain Mapping Literature and an Anatomo-Functional Cerebral Model. In //Human Brain Mapping//, Florence, Italy, jun 2006. 
 +   
 +  * J. Atif, O. Nempont, O. Colliot, E. Angelini, and I. Bloch. Level Set Deformable Models Constrained by Fuzzy Spatial Relation. In //​Information Processing and Management of Uncertainty in Knowledge-Based Systems//, IPMU, pages 1534–1541,​ Paris, France, 2006. 
 +   
 +  * B. Batrancourt,​ J. Atif, O. Nempont, E. Angelini, and I. Bloch. Integrating Information from Pathological Brain MRI into an Anatomo-Functional Model. In //24th IASTED International Multi-Conference on Biomedical Engineering//,​ pages 236–241, Innsbruck, Austria, feb 2006. 
 + 
 +  * C. Hudelot, J. Atif, and I. Bloch. Ontologie de relations spatiales floues pour l’interprétation d’images. In //​Rencontres francophones sur la Logique Floue et ses Applications,​ LFA// Toulouse, France, oct 2006. 
 + 
 +  * H. Khotanlou, J. Atif, B. Batrancourt,​ O. Colliot, E. Angelini, and I. Bloch. Segmentation de tumeurs cérébrales et intégration dans un modèle de l’anatomie. In //​Reconnaissance des Formes et Intelligence Artificielle//,​ RFIA’06, Tours, France, jan 2006.{{research:​rfia2006hassan.pdf|pdf}} 
 +   
 +  
 +==2005== 
 +   * H. Khotanlou, J. Atif, O. Colliot, and I. Bloch. 3D Brain Tumor Segmentation Using Fuzzy Classification and Deformable Models. In //WILF//, volume LNAI 3849, pages 312–318, Crema, Italy, sep 2005.{{research:​wilf2005_hassan.pdf|pdf}} 
 + 
 +   * O. Nempont, J. Atif, A. Herment, I. Bloch, and P. Carlier. Graph-Based Segmentation of Muscles on NMR Images: Preliminary Results. In 2005 Workshop on Investigation of Human Muscle Function, Nashville, TN, USA, 2005. 
 +   
 +  * A. Tarault, J. Atif, X. Ripoche, P. Bourdot, and A. Osorio. Classification of radiological exams and organs by belief theory. The //3rd ACS/IEEE International Conference on Computer Systems and Applications//,​ Cairo, Egypt 2005. 
 + 
 +==2004== 
 +  * J. Atif, X. Ripoche, and A. Osorio. Combined quadratic mutual information to a new adaptive kernel density estimator for non rigid image registration. In //SPIE Medical Imaging Conference, San Diego, California//,​ USA, 2004. 
 + 
 +  * X. Ripoche, J. Atif, and A. Osorio. Three dimensional discrete deformable model guided by mutual information for medical image segmentation. In //SPIE Medical Imaging Conference//,​ San Diego, California, USA, 2004. 
 + 
 +  * J. Atif, A. Osorio, B. Devaux, and Fran ̧cois-Xavier Roux. Integration of short-distance radiological images, angiography and multimodal image fusion in a stereotaxic software environment for biopsy intervention. In CARS, page 1312, 2004. 
 + 
 +  * Angel Osorio, Olivier Traxer, Jamal Atif, Xavier Ripoche, Mohamed Tligui, and Bernard Gattegno. Percutaneous nephrolithotomies improvement us- ing a new augmented reality system integrated into operating rooms. In CARS, page 1322, 2004. 
 + 
 +  * A. Osorio, B. Devaux, R. Clodic, J. Atif, X. Ripoche, and F-X. Roux. A new Augmented Reality system for brain surgery improvements merging fluoroscopic 2D images, MR and CT 3D segmentations and Talairach atlas. In InfoRAD 2004, Radiological Society of North America RSNA-04, Chicago, USA, 2004.
  
-==== Peer-Reviewed National Journals ==== +  * AOsorioOTraxerSMerranXRipocheand J. Atif. Real time fusion of 2D fluoroscopic ​and 3D segmented CT images integrated into an Augmented Reality system for percutaneous nephrolithotomies ​(PCNL). In InfoRAD 2004Radiological Society of North America RSNA-04, Chicago, USA, 2004. Cette Communication a reçu le prix (Cum Laude).
-  - CHudelotJAtifand IBloch. FSRO : une ontologie de relations spatiales floues pour l’inteprétation d’images. //Revue Nouvelles Technologies de l'​Information ​ (RNTI)//14 :55–86, 2008. +
-  - O. Nempont, J. Atif, ED. Angelini, ​and I. Bloch. Propagation de contraintes pour la segmentation et la reconnaissance de structures ana- tomiques à partir d’un modèle structurel. //​Information - Interaction ​Intelligence ​(I3)//10(1), December 2010. {{research:​i3_nempont.pdf|pdf}}+
  
-==== Submitted Peer-Reviewed Journals ==== +==2003== 
-  ​- SChevallierQBarthelemy, and JAtifMetrics for multivariate framesSubmitted to //Journal of Machine Learning research//, 2013[[http://​arxiv.org/​abs/​1302.4242/​|ArXiv Version]]+  ​* JAtifXRipoche, and AOsorioNon-rigid medical image registra- tion by maximisation of quadratic mutual informationIn //IEEE 29th Annual Northeast Bioengineering Conference//, pages 32–40, Newark NJ, USA, march 2003.
  
 +  * J.Atif, X.Ripoche,​C.Coussinet,​and A.Osorio. Recalage ​ élastique d’images médicales par maximisation de l’information mutuelle quadratique. In //GRETSI//, Paris, France, 2003.
  
-==== Peer-Reviewed International Conferences ====+  * A. Mihalcea, X. Ripoche, J. Atif, P.J. Valette, and A. Osorio. A new PC based software for semi automatic liver segmentation. Clinical study for preoperative tumor localization. In InfoRAD 2003, Radiological Society of North America RSNA-03, Chicago, USA, 2003.
  
-       +  * A. Osorio, O. TraxerSMerranXRipoche, and J. Atif. 3D reconstruction ​and instant ​volume ​measurement ​of complex renal calculiapplication ​to percutaneous nephrolithotomy. In InfoRAD 2003Radiological Society ​of North America RSNA-03Chicago, USA, 2003Cette Communication a reu le prix (Certificate ​of merit).
-  - J. Atif, C. Hudelot, and I. Bloch. {{research:​cla_atif11.pdf|Abduction in description logics using formal concept analysis and mathematical morphology: application to image interpretation}}. In //8th International Conference on Concept Lattices and Their Applications (CLA2011)//,​ pages 405–408, Nancy, France, October 2011. +
-  - C. Hudelot, J. Atif, and I. Bloch. {{research:​ecai2010_hudelot.pdf|Integrating bipolar fuzzy mathematical morphology in description logics for spatial reasoning}}. In //European Conference on Artificial Intelligence (ECAI)//, pages 497–502, Lisbon, Portugal, August 2010. +
-  - J. Atif and J. Darbon. {{research:​icip.atifdarbon.09.pdf|Copula-set measures over topographic maps for change detection}}. In //IEEE International Conference on Image Processing//,​ pages 2881 – 2884, Cairo, Egypt, Nov 2009. +
-  - C. Hudelot, J. Atif, and I. Bloch. {{research:​ecai2008_celine.pdf|Spatial Relation Ontology Using Mathematical Morphology and Description Logics for Spatial Reasoning}}In //​ECAI-Workshop on Spatial and Temporal Reasoning//pages 21–25, Patras, Greece, jul 2008. +
-  - O. NempontJAtifEAngelini, and I. Bloch. {{research:​ecai2008_olivier.pdf|Structure Segmentation and Recognition in Images Guided by Structural Constraint Propagation}}. In //European Conference on Artificial Intelligence (ECAI)//, pages 621–625, Patras, Greece, jul 2008. +
-  - G. Fouquier, ​J. Atif, and IBloch. {{research:​ecai2008-geoffroy.pdf|Sequential Spatial Reasoning in Images based on Pre-Attention Mechanisms ​and Fuzzy Attribute Graphs}}. In //European Conference on Artificial Intelligence (ECAI)//, pages 611–615, Patras, Greece, jul 2008. +
-  - O. Nempont, J. Atif, E. Angelini, and I. Bloch. {{research:​ipmu2008olivier.pdf|Fuzzy Attribute Openings Based on a New Fuzzy Connectivity Class. Application to Structural Recognition in Images}}. In //​International Conference on Information Processing and Managmenent of Uncertainty (IPMU)//, pages 652–659, Malaga, Spain, jun 2008.  +
-  - G. Fouquier, J. Atif, and I. Bloch. {{research:​ipmu2008geoffroy.pdf|Incorporating a pre-attention mechanism in fuzzy attribute graphs for sequential image segmentation}}. In //​International Conference on Information Processing and Management of Uncertainty (IPMU)//, pages 840–847, Torremolinos (Malaga), Spain, jun 2008. +
-  - O. Nempont, J. Atif, E. Angelini, and I. Bloch. {{research:​dgci2008nempont.pdf|A New Fuzzy Connectivity Class. Application to Structural Recognition in Images}}. In //Discrete Geometry for Computer Imagery (DGCI)//, ​volume ​LNCS 4992, pages 446–457, Lyon, 2008. +
-  - E. Aldea, G. Fouquier, J. Atif, and I. Bloch. {{research:​2007.isvc.fouquier.pdf|Kernel Fusion for Image Classification Using Fuzzy Structural Information}}. In //3rd International Symposium on Visual Computing ISVC07//, volume LNCS 4842, pages 307– 317, Lake Tahoe, USA, nov 2007. +
-  - ED Angelini, J. Atif, J. Delon, E. Mandonnet, H. Duffau, and L. Capelle. Detection ​of glioma evolution on longitudinal MRI studies. In //4th IEEE International Symposium on Biomedical ImagingFrom Nano to Macro//. ISBI, pages 49–52, 2007. +
-  - J. Atif, C. Hudelot, G. Fouquier, I. Bloch, and E. Angelini. {{research:​ijcai07-034.pdf|From Generic Knowledge to Specific Reasoning for Medical Image Interpretation using Graph-based Representations}}. In //​International Joint Conference on Artificial Intelligence (IJCAI)//pages 224–229, 2007, Hyderabad, India, jan 2007. +
-  - C. Hudelot, J. Atif, and I. Bloch. An Ontology ​of Spatial Relations using Fuzzy Concrete Domains. In //AISB symposium on Spatial Reasoning and Communication//,​ Newcastle, UK, apr 2007. +
-  ​O. NempontJ. Atif, E. Angelini, and I. Bloch. {{research:​ipmi2007nempont.pdf|Combining Radiometric and Spatial Structural Information in a New Metric for Minimal Surface Segmentation}}. In //​Information Processing in Medical Imaging// (IPMI 2007), volume LNCS 4584, pages 283–295, Kerkrade, The Netherlands,​ jul 2007.  +
-  - E. Aldea, J. Atif, and I. Bloch. {{research:​gbr2007-emi.pdf|Image Classification using Marginalized Kernels for Graphs}}. In //6th IAPR-TC15 Workshop on Graph-based Representations in Pattern Recognition//,​ GbR’07, volume 1, pages 103–113, Ali- cante, Spain, jun 2007. +
-  - G. Fouquier, J. Atif, and I. Bloch. {{research:​2007.gbr.fouquier.pdf|Local Reasoning in Fuzzy Attributes Graphs for Optimizing Sequential Segmentation}}. In 6th //IAPR-TC15 Workshop on Graph-based Representations in Pattern Recognition//,​ GbR’07, volume 1, pages 138–147, Alicante, Spain, jun 2007.  +
-  - J. Atif, C. Hudelot, O. Nempont, N. Richard, B. Batrancourt,​ E. Angelini, and I. Bloch. {{research:​isbi07_jamal.pdf|GRAFIP:​ A Framework for the Representation of Healthy and Pathological Cerebral Information}}. In //ISBI// 2007, pages 205–208, Washington DC, USA, apr 2007. +
-  - I. Bloch, C. Hudelot, and J. Atif. {{research:​icapr07_invited.pdf|On the Interest of Spatial Relations and Fuzzy Representations for Ontology-Based Image Interpretation}}. In International Conference on Advances in Pattern Recognition,​ ICAPR’07, pages 15–25, Kolkata, India, jan 2007. **Invited paper**.  +
-  - H. Khotanlou, J. Atif, E. Angelini, H. Duffau, and I. Bloch. {{research:​isbi07_hassan.pdf|Adaptive Segmentation of Internal Brain Structures in Pathological MR Images Depending on Tumor Types}}. In //ISBI// 2007, pages 588–591, Washington DC, USA, apr 2007.  +
-  - J. Atif, H. Khotanlou, E. Angelini, H. Duffau, and I. Bloch. Segmentation of Internal Brain Structures in the Presence of a Tumor. In //MICCAI Workshop on Clinical Oncology//, pages 61–68, Copenhagen, oct 2006. +
-  - J. Puentes, B. Batrancourt,​ L. Lecornu, J. Atif, A. Zemirline, G. Coatrieux, E. Angelini, I. Bloch, and C. Roux. Enhancing Electronic Patient Record Functionality through Information Extraction from Images. In //IEEE International Conference on Information and Communication ​Technologies:​ From Theory To Applications//​ ICTTA 2006, pages 978–983, Damascus, Syria, apr 2006. +
-  - C. Hudelot, J. Atif, O. Nempont, B. Batrancourt,​ E. Angelini, and I. Bloch. GRAFIP: ​Framework for the Representation ​of Healthy and Pathological Anatomical and Functional Cerebral Information. In //Human Brain Mapping//, Florence, Italy, jun 2006. +
-  - B. Batrancourt,​ D. Hasboun, J. Atif, C. Hudelot, E. Angelini, and I. Bloch. A Clustering View of the Human Brain Mapping Literature and an Anatomo-Functional Cerebral Model. In //Human Brain Mapping//, Florence, Italy, jun 2006. +
-  - J. Atif, O. Nempont, O. Colliot, E. Angelini, and I. Bloch. Level Set Deformable Models Constrained by Fuzzy Spatial Relation. In //​Information Processing and Management of Uncertainty in Knowledge-Based Systems//, IPMU, pages 1534–1541,​ Paris, France, 2006. +
-  - B. Batrancourt,​ J. Atif, O. Nempont, E. Angelini, and I. Bloch. Integrating Information from Pathological Brain MRI into an Anatomo-Functional Model. In //24th IASTED International Multi-Conference on Biomedical Engineering//,​ pages 236–241, Innsbruck, Austria, feb 2006. +
-  - H. Khotanlou, J. Atif, O. Colliot, and I. Bloch. 3D Brain Tumor Segmentation Using Fuzzy Classification and Deformable Models. In //WILF//, volume LNAI 3849, pages 312–318, Crema, Italy, sep 2005.{{research:​wilf2005_hassan.pdf|pdf}} +
-  - A. Tarault, J. Atif, X. Ripoche, P. Bourdot, and A. Osorio. Classification of radiological exams and organs by belief theory. The //3rd ACS/IEEE International Conference on Computer Systems and Applications//,​ Cairo, Egypt 2005. +
-  - J. Atif, X. Ripoche, and A. Osorio. Non-rigid medical image registra- tion by maximisation of quadratic mutual information. In //IEEE 29th Annual Northeast Bioengineering Conference//,​ pages 32–40, Newark NJ, USA, march 2003. +
-  - J. Atif, X. Ripoche, and A. Osorio. Combined quadratic mutual information to a new adaptive kernel density estimator for non rigid image registration. In //SPIE Medical Imaging Conference, San Diego, California//,​ USA, 2004. +
-  - X. Ripoche, J. Atif, and A. Osorio. Three dimensional discrete deformable model guided by mutual information for medical image segmentation. In //SPIE Medical Imaging Conference//,​ San Diego, California, USA, 2004.+
  
-==== Pee-Reviewed National Conferences ==== +  * OTraxerAOsorioSMerran, J. Atif, XRipoche, and MTliguiAn augmented reality system for percutaneous nephrolithotomy. In InfoRAD 2003Radiological Society of North America RSNA-02ChicagoUSA2003Cette Communication a reçu le prix (Certificate of merit).
-  -  YIsaacQBarthélémyJAtifC. Gouy-Pailler,​ and M. Sebag. Régularisations spatiales pour la décomposition de signaux eeg sur un dictionnaire temps-fréquence. In GRETSI, Groupe d’Etudes du Traitement du Signal et des Images, pages xxx–xx, Brest, France, September 2013. +
-  - J. Atif, CHudelot, and IBlochAbduction dans les logiques de description : apport de l’analyse formelle de concepts et de la morphologie mathématique. In //​Représentation et Raisonnement sur le Temps et l’Espace (Atelier RTE 2011)//, Chambery, France, May 2011.{{research:​rte2011.pdf|pdf}} +
-  ​C. HudelotJ. Atif, and I. Bloch. Intégration de la morphologie mathématique floue dans une logique de description pour le raisonnement spatial. In // Rencontres Francophones sur la Logique Floue et ses Applications (LFA)//, pages 336–343, Lens, France, oct 2008. +
-  ​E. AldeaG. FouquierJ. Atifand IBloch. Classification d’images par fusion d’attributs flous de graphes, relations spatiales et noyaux marginalisés. In// Rencontres Francophones sur la Logique Floue et ses Applications ​(LFA 2007)//, pages 25–32, Nimes, France, nov 2007. +
-  - J. Atif, C. Hudelot, and I. Bloch. Adaptation de connaissances génériques pour l’interprétation d’images médicales : représentations par onologies et par graphes et modélisation floue. In //7e journées francophones Extraction et Gestion des Connaissances - Extraction de Connaissances et Images (EGC-ECOI’07)//,​ pages 51–61, Namur, Belgique, jan 2007.{{research:​egc-ecoi07.pdf|pdf}} +
-  - C. Hudelot, J. Atif, and I. Bloch. Ontologie de relations spatiales floues pour l’interprétation d’images. In //​Rencontres francophones sur la Logique Floue et ses Applications,​ LFA// Toulouse, France, oct 2006. +
-  - H. Khotanlou, J. Atif, B. Batrancourt,​ O. Colliot, E. Angelini, and I. Bloch. Segmentation de tumeurs cérébrales et intégration dans un modèle de l’anatomie. In //​Reconnaissance des Formes et Intelligence Artificielle//,​ RFIA’06, Tours, France, jan 2006.{{research:​rfia2006hassan.pdf|pdf}} +
-  - J.Atif, X.Ripoche,​C.Coussinet,​and A.Osorio. Recalage ​ élastique d’images médicales par maximisation de l’information mutuelle quadratique. In //GRETSI//, Paris, France, 2003.+
  
-==== Peer-Reviewed Abstracts ==== +==2002==   ​ 
-  ​- O. Nempont, J. Atif, A. Herment, I. Bloch, and P. Carlier. Graph-Based Segmentation of Muscles on NMR Images: Preliminary Results. In 2005 Workshop on Investigation of Human Muscle Function, Nashville, TN, USA, 2005. +  ​V. Servois, A. Osorio, and Atif. A new pc based software for prostatic 3d segmentation and volume measurement. application to permanent prostate brachytherapy (PPB) evaluation using ct and mr images fusion. In In- foRAD 2002, Radiological Society of North America RSNA-02, Chicago, USA, 2002.
-  - J. Atif, A. Osorio, B. Devaux, and Fran ̧cois-Xavier Roux. Integration of short-distance radiological images, angiography and multimodal image fusion in a stereotaxic software environment for biopsy intervention. In CARS, page 1312, 2004. +
-  - Angel Osorio, Olivier Traxer, Jamal Atif, Xavier Ripoche, Mohamed Tligui, and Bernard Gattegno. Percutaneous nephrolithotomies improvement us- ing a new augmented reality system integrated into operating rooms. In CARS, page 1322, 2004. +
-  - V. Servois, A. Osorio, and Atif. A new pc based software for prostatic 3d segmentation and volume measurement. application to permanent prostate brachytherapy (PPB) evaluation using ct and mr images fusion. In In- foRAD 2002, Radiological Society of North America RSNA-02, Chicago, USA, 2002+
-  - A. Osorio, B. Devaux, R. Clodic, J. Atif, X. Ripoche, and F-X. Roux. A new Augmented Reality system for brain surgery improvements merging fluoroscopic 2D images, MR and CT 3D segmentations and Talairach atlas. In InfoRAD 2004, Radiological Society of North America RSNA-04, Chicago, USA, 2004. +
-  - A. Osorio, O. Traxer, S. Merran, X. Ripoche, and J. Atif. Real time fusion of 2D fluoroscopic and 3D segmented CT images integrated into an Aug- mented Reality system for percutaneous nephrolithotomies (PCNL). In InfoRAD 2004, Radiological Society of North America RSNA-04, Chicago, USA, 2004. Cette Communication a reu le prix (Cum Laude). +
-  - A. Mihalcea, X. Ripoche, J. Atif, P.J. Valette, and A. Osorio. A new PC based software for semi automatic liver segmentation. Clinical study for preoperative tumor localization. In InfoRAD 2003, Radiological Society of North America RSNA-03, Chicago, USA, 2003. +
-  - A. Osorio, O. Traxer, S. Merran, X. Ripoche, and J. Atif. 3D reconstruction and instant volume measurement of complex renal calculi: application to percutaneous nephrolithotomy. In InfoRAD 2003, Radiological Society of North America RSNA-03, Chicago, USA, 2003. Cette Communication a reu le prix (Certificate of merit). +
-  - O. Traxer, A. Osorio, S. Merran, J. Atif, X. Ripoche, and M. Tligui. An augmented reality system for percutaneous nephrolithotomy. In In- foRAD 2003, Radiological Society of North America RSNA-02, Chicago, USA, 2003. Cette Communication a reu le prix (Certificate of merit).+
  
 ==== Manuscripts ==== ==== Manuscripts ====
   - J. Atif. {{Research:​these_jamalatif.pdf|Recalage non-rigide multimodal des images radiologiques par information mutuelle quadratique normalisée}}. Mémoire de thèse, Université de Paris–Sud 11, Orsay, 29 Novembre 2004.   - J. Atif. {{Research:​these_jamalatif.pdf|Recalage non-rigide multimodal des images radiologiques par information mutuelle quadratique normalisée}}. Mémoire de thèse, Université de Paris–Sud 11, Orsay, 29 Novembre 2004.
   - J. Atif. {{Research:​hdr_jamal_qualif.pdf|Quelques contributions à l’interprétation d’images, l’apprentissage statistique et la cartographie cérébrale}}. Document d’habilitation à diriger des recherches, Université de Paris–Sud 11, 31 octobre 2013.   - J. Atif. {{Research:​hdr_jamal_qualif.pdf|Quelques contributions à l’interprétation d’images, l’apprentissage statistique et la cartographie cérébrale}}. Document d’habilitation à diriger des recherches, Université de Paris–Sud 11, 31 octobre 2013.
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